Esa-MIR171d

Basic info.

• miRNA locus ID
• Esa-MIR171d

• miRNA locus accession
• PmiREN005632

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_5  11619062  11619185  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TTTTGATGTAAGGTAAC   A      A             A     --    G    TAGT
                   GCG GATATT GTGCGGTTCAATC AATAG  CCGA CTCT    
                   ||| |||||| ||||||||||||| |||||  |||| ||||     
                   CGC CTATAA CGTGCCGAGTTAG TTGTC  GGCT GAGA    
GAACAGTAGAGCCGAATTA   A      C             C     TT    A    TATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference