Esa-MIR171e

Basic info.

• miRNA locus ID
• Esa-MIR171e

• miRNA locus accession
• PmiREN005633

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_8  2266336  2266459  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

T    C  A  --GGCAAT   --A                    -CAA      CA   CCTTT
 GATG AA GT        ACG   GATATTGGTGCGGTTCAATC    AAACCG  CTC     
 |||| || ||        |||   ||||||||||||||||||||    ||||||  |||     T
 CTAC TT CA        TGC   CTATAACCGTGCCGAGTTAG    TTTGGC  GAG     
     -  C  AAATAATT   GCA                    TTTG      TA   ATGTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference