Fan-MIR171k

Basic info.

• miRNA locus ID
• Fan-MIR171k

• miRNA locus accession
• PmiREN006388

• Organism
• Fragaria ananassa

• Genomic location
• Fan-BATT01093983.1  879  978  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TTGTTTTGATGAGAAATGTA         A                   TCT   AAG
                    TGATATTGG ATGGCTCAATCAAATCAAA   CCC   
                    ||||||||| |||||||||||||||||||   |||   A
                    ACTATAACC TGCCGAGTTAGTTTAGTTT   GGG   
                 GAC         G                   CCT   CTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 3423
• Chromosome: Fan-BATT01093983.1
• Cluster start: 700
• Cluster end: 978

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference