Mtr-MIR171b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
A                C       TGAA         -   AAAAT
 GCAAGGTATTGGCGCG CTCAATT    TACATGGCT ATA     
 |||||||||||||||| |||||||    ||||||||| |||     G
 TGTTCTATAACTGCGC GAGTTAG    ATGTACCGA TAT     
T                C       TTTG         C   ACTAC

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Mtr-MIR171b ,   Mtr-MIR171m PmiREN011402, PmiREN011399 Mtr-chr2 + 37124695 37124804

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Medtr0092s0100.2 1.0 NA NA
Medtr4g026485.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference