Mac-MIR159d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
GATTTTTT         ---------            GA        GGAG G  - TGGTAGGGTGGATTGAGCTGCTGGTTTATGGATTCCACTGCCGTATTCCATGTTTTCTTTGCT
        GGGTTGGAG         GTGGAGCTCCTT  AGTCCAAA    G TC T                                                               
        |||||||||         ||||||||||||  ||||||||    | || |                                                                
        TTCAACCTC         CATCTCGAGGGA  TTAGGTTT    T GG T                                                               
       T         ATTTGTCTA            AG        ---A -  G CGAGGACTCAATACGTTTGGTGTTCGGATAGGGTTTTGTAAGTGGTAGAAACAGTAGTCGATA

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Mac-MIR159a ,   Mac-MIR159d PmiREN012012, PmiREN012015 Mac-chr4 + 10099736 10109631

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

GSMUA_Achr1T01660_001 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference