Oeu-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   ATCC        G   T  C         CT         --  A  TT     G ATT
       GAGGAGTA ACA GG GTGATATTG  TTTGGCTCA  GC CT  CTGTT A   
       |||||||| ||| || |||||||||  |||||||||  || ||  ||||| |   T
       TTCTTCGT TGT CT CACTATAAC  AAGCCGAGT  CG GG  GACAA T   
ACTACGT        A   T  -         -T         AG  -  TT     G ACG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Oeu-MIR171e ,   Oeu-MIR171f PmiREN013265, PmiREN013266 Oeu-CM008515.1 + 18646388 18649213

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023031239.1 0.0 0 NA
XR_002704367.1 0.0 0 NA
XM_023024719.1 0.5 0 NA
XM_023024720.1 0.5 0 NA
XM_023024415.1 1.5 NA NA
XM_023024416.1 1.5 NA NA
XM_023024417.1 1.5 NA NA
XM_023039016.1 1.5 NA NA
XM_023039017.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference