Qro-MIR171h

Basic info.

• miRNA locus ID
• Qro-MIR171h

• miRNA locus accession
• PmiREN018131

• Organism
• Quercus robur

• Genomic location
• Qro-LT985741.1  12059484  12059593  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

 ATGCAAAGAACCAT     -A           T      A    GGA     GGA
               ACAAG  GTGATATTGGT CGGCTC TCTT   GCTTT   
               |||||  ||||||||||| |||||| ||||   |||||   T
               TGTTC  CACTATGACCA GTCGAG AGAA   TGAAA   
AAGTACTCCTTCATC     CA           T      C    -GA     GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 4066
• Chromosome: Qro-LT985741.1
• Cluster start: 12053966
• Cluster end: 12059593

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference