Spo-MIR157c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTTGATGGGCGCGGGGAT  T         -              T  -   A     G  AG
                    TG TGACAGAAG ATAGAGAGCACAGA GA TCA GTGCA GG  
                    || ||||||||| |||||||||||||| || ||| ||||| ||   
                    AC ACTGTCTTC TGTCTCTCGTGTTT CT AGT CGCGT CT  
CTCTATAATGACCAACTTCT  T         A              C  C   C     G  GG

miRNA cluster info.

miRNA locus ID miRNA locus accession Chromosome Strand Start End
Spo-MIR157b ,   Spo-MIR157c PmiREN020140, PmiREN020141 Spo-pseudo18 + 2269262 2270864

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Spipo10G0020600 1.5 1 NA
Spipo12G0064300 1.5 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference