Bra-MIR390e

Basic info.

• miRNA locus ID
• Bra-MIR390e

• miRNA locus accession
• PmiREN002506

• Organism
• Brassica rapa

• Genomic location
• Bra-A03  9608347  9608461  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

   AA    C      A  T  A          G           TC  C    TCTCAT
     AGTA AGAAGA TC GT AAGCTCAGGA GGATAGCGCCA  AT ATCA      
     |||| |||||| || || |||||||||| |||||||||||  || ||||       
     TCAT TCTTCT GG TA TTTGAGTCCT CCTGTCGCGGT  TA TAGT      
TAACA    -      C  T  C          A           TT  -    TAAACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference