Cru-MIR390b

Basic info.

• miRNA locus ID
• Cru-MIR390b

• miRNA locus accession
• PmiREN002788

• Organism
• Capsella rubella

• Genomic location
• Cru-scaffold_8  9836443  9836569  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

        AGTA     GT      AA    C    G             -- CTCACCAATACTTGTA
      GT    GAGAA  AGCTGT  AGCT AGGA GGATAGCGCCATG  G                
      ||    |||||  ||||||  |||| |||| |||||||||||||  |                T
      CG    TTCTT  TCGGTA  TTGA TCCT CCTATCGCGGTTG  T                
TATATT  ----     AT      CC    A    A             TC ATACGCACATGTTTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference