Bra-MIR399b

Basic info.

• miRNA locus ID
• Bra-MIR399b

• miRNA locus accession
• PmiREN002537

• Organism
• Brassica rapa

• Genomic location
• Bra-A06  18155327  18155453  -

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

 CAA    -AA       A        T      G      C C A T T    C    T TCTT
    TAAG   GAGTAGT ATAGGGCA CTTTCT TTGGCA G G C G GCCA TTGC C    
    ||||   ||||||| |||||||| |||||| |||||| | | | | |||| |||| |     
    ATTC   TTCGTCA TGTCCCGT GAGAGG AACCGT C C G C CGGT GGTG G    
TTAA    GCC       C        T      A      T A - T T    T    T TTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference