Esa-MIR165

Basic info.

• miRNA locus ID
• Esa-MIR165

• miRNA locus accession
• PmiREN005608

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_5  15258725  15258867  -

• Comments
• A member of family MIR165

• Confidence level
• 

Secondary strurture and sequence

 TTAA  T  TT  -    A    A   TT      A           ATA      -GCCA   ATGTATAT
     GC AT  CA GTTG GGGG ATG  GTCTGG TCGAGGATATT   TATATA     TAC        
     || ||  || |||| |||| |||  |||||| |||||||||||   ||||||     |||         
     CG TA  GT CAAC CCCC TAC  CGGACC GGCTCCTATGA   ATATAT     ATG        
GTCTC  T  TT  A    C    C   TT      A           GAG      GCATA   CTAGTCAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference