Esa-MIR319c

Basic info.

• miRNA locus ID
• Esa-MIR319c

• miRNA locus accession
• PmiREN005638

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_1  6999831  7000041  -

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

TGGTA       ATTTGT     ----        G      T   T   TC  G T           A -  T   AC        C  AA  C      ACCAAGAA
     GGAATAC      AGAGA    GCTTCCTT AGTCCA TCA AGG  GT A ATGATCCAATT G CT CCG  TCATTCAT CA  TA CGAGTC        
     |||||||      |||||    |||||||| |||||| ||| |||  || | ||||||||||| | || |||  |||||||| ||  || ||||||        T
     CCTTATG      TCTCT    CGAGGGAA TCAGGT AGT TCT  TA T TACTGGGTTAA C GA GGC  AGTAAGTA GT  AT GTTCAG        
 TTAA       -GTTTT     CCCT        G      T   C   CT  G -           A A  T   GT        A  AA  T      ATCGAGCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference