Esa-MIR390a

Basic info.

• miRNA locus ID
• Esa-MIR390a

• miRNA locus accession
• PmiREN005640

• Organism
• Eutrema salsugineum

• Genomic location
• Esa-scaffold_10  9718512  9718623  +

• Comments
• A member of family MIR390

• Confidence level
• 

Secondary strurture and sequence

AAA    --      A  T  A          G           TGATT     ATT
   GTAG  AGAAGA TC GT AAGCTCAGGA GGATAGCGCCA     GTCAG   
   ||||  |||||| || || |||||||||| |||||||||||     |||||   C
   CATC  TCTTCT GG TA TTTGAGTCCT CCTGTCGCGGT     TAGTT   
TAA    GT      C  T  C          A           -TTTT     ACA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference